miRBase entry: nta-MIR6151c

Stem-loop nta-MIR6151c


Accession
MI0021434
Description
Nicotiana tabacum nta-MIR6151c precursor miRNA


Sequence

2465 reads, 516.0 reads per million, 39 experiments
auucguuggaUGAAUGUGAGGCAUUGGAUUGAuuucguucAAUCCGAGCCCUACAUUCAUCagggguucgu
..((.(((.(((((((((.(((.(((((((((......)))))))))))).)))))))))))).)).....

Structure
---au  g   g         A   A         uu 
     uc uug aUGAAUGUG GGC UUGGAUUGA  u
     || ||| ||||||||| ||| |||||||||   
     gg gaC UACUUACAU CCG AGCCUAAcu  c
ugcuu  g   -         C   -         ug 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6151c-5p

Accession MIMAT0024744
Description Nicotiana tabacum nta-miR6151c-5p mature miRNA
Sequence 11 - UGAAUGUGAGGCAUUGGAUUGA - 32
Evidence experimental
Illumina [1]

Mature nta-miR6151c-3p

Accession MIMAT0058139
Description Nicotiana tabacum nta-miR6151c-3p mature miRNA
Sequence 41 - AAUCCGAGCCCUACAUUCAUC - 61
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28