miRBase entry: nta-MIR6151d

Stem-loop nta-MIR6151d


Accession
MI0021435
Description
Nicotiana tabacum nta-MIR6151d precursor miRNA


Sequence

5698 reads, 884.0 reads per million, 44 experiments
auuuauuggaUGAAUGUGAGGCAUUGGAUUGAuuucacucAAUCCGAGCCCCACAUUCAUCagggguucgu
........((((((((((.(((.(((((((((......)))))))))))).))))))))))..........

Structure
--auuuauug          A   A         uu 
          gaUGAAUGUG GGC UUGGAUUGA  u
          |||||||||| ||| |||||||||   
          CUACUUACAC CCG AGCCUAAcu  c
ugcuugggga          C   -         ca 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6151d-5p

Accession MIMAT0024745
Description Nicotiana tabacum nta-miR6151d-5p mature miRNA
Sequence 11 - UGAAUGUGAGGCAUUGGAUUGA - 32
Evidence experimental
Illumina [1]

Mature nta-miR6151d-3p

Accession MIMAT0058140
Description Nicotiana tabacum nta-miR6151d-3p mature miRNA
Sequence 41 - AAUCCGAGCCCCACAUUCAUC - 61
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28