miRBase entry: nta-MIR6152a

Stem-loop nta-MIR6152a


Accession
MI0021441
Description
Nicotiana tabacum nta-MIR6152a precursor miRNA


Sequence

21876 reads, 2874.0 reads per million, 43 experiments
uuggacagauUAUUGUAUUCGACUGUAUUCACGGcgugaaauagggauuacacuguuuuuuaaacggaaagugaAUCAAUUAACAUAAUAGACUCCUAauaua
..(((....(((((((.((.((.((.((((((..((((((((((........)))))))....)))....)))))))).)))).)))))))..))).......

Structure
-----uu   caga       A  C  C  U      --GG   ----       gga 
       gga    uUAUUGU UU GA UG AUUCAC    cgu    gaaauag   u
       |||    ||||||| || || || ||||||    |||    |||||||    
       CCU    GAUAAUA AA UU AC UAagug    gca    uuuuguc   u
auauaAU   --CA       C  -  A  -      aaag   aauu       aca 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6152a-5p

Accession MIMAT0024751
Description Nicotiana tabacum nta-miR6152a-5p mature miRNA
Sequence 11 - UAUUGUAUUCGACUGUAUUCACGG - 34
Evidence experimental
Illumina [1]

Mature nta-miR6152a-3p

Accession MIMAT0058146
Description Nicotiana tabacum nta-miR6152a-3p mature miRNA
Sequence 75 - AUCAAUUAACAUAAUAGACUCCUA - 98
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28