miRBase entry: nta-MIR6155

Stem-loop nta-MIR6155


Accession
MI0021447
Description
Nicotiana tabacum nta-MIR6155 precursor miRNA


Sequence

35233 reads, 2899.0 reads per million, 43 experiments
gcaggugugaUAAGGUUGCCUUGCUCUUGCAuucucuuagauaauuugauucagcuugcugccugaauuaaauuuuuugguagagagaaUUCGAGAGCAAGGCUACCUCAUGauacgugcag
(((.((((.((.((((.((((((((((((.(((((((((((.(((((((((((((.....).)))))))))))).)))....)))))))).)))))))))))).)))).)).)))).)))..

Structure
--   g    g  A    U            C        ----   u            - u 
  gca gugu aU AGGU GCCUUGCUCUUG Auucucuu    aga aauuugauucag c u
  ||| |||| || |||| |||||||||||| ||||||||    ||| |||||||||||| | g
  cgu caua UA UCCA CGGAACGAGAGC Uaagagag    uuu uuaaauuaaguc g c
ga   g    G  C    U            U        augg   u            c u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6155-5p

Accession MIMAT0024757
Description Nicotiana tabacum nta-miR6155-5p mature miRNA
Sequence 11 - UAAGGUUGCCUUGCUCUUGCA - 31
Evidence experimental
Illumina [1]

Mature nta-miR6155-3p

Accession MIMAT0058152
Description Nicotiana tabacum nta-miR6155-3p mature miRNA
Sequence 90 - UUCGAGAGCAAGGCUACCUCAUG - 112
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28