Stem-loop nta-MIR6145c

Accession

MI0021448

Description

Nicotiana tabacum nta-MIR6145c precursor miRNA

Sequence

185324 reads, 8791.0 reads per million, 45 experiments

ugcaaaaaguuAUUGUUAUAUGUUGCACUGGCCaaaauuggagauuccuggcCAGUGCACAUAUAACAGUAAuuuuagcuug
.((..((((((((((((((((((.((((((((((.....(((...))))))))))))))))))))))))))))))).))...

Structure

--u  aa                  U          aaauu   g 
   gc  aaaguuAUUGUUAUAUGU GCACUGGCCa     gga  
   ||  |||||||||||||||||| ||||||||||     ||| a
   cg  uuuuAAUGACAAUAUACA CGUGACcggu     ccu  
guu  -a                  -          -----   u 

Annotation confidence High

Genome context

Unknown

Mature nta-miR6145c-5p

• Accession: MIMAT0058153
• Description: Nicotiana tabacum nta-miR6145c-5p mature miRNA
• Sequence: 12 - AUUGUUAUAUGUUGCACUGGCC - 33
• Evidence: experimental ; unknown

Mature nta-miR6145c-3p

• Accession: MIMAT0024758
• Description: Nicotiana tabacum nta-miR6145c-3p mature miRNA
• Sequence: 53 - CAGUGCACAUAUAACAGUAA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28