miRBase entry: nta-MIR6156

Stem-loop nta-MIR6156


Accession
MI0021449
Description
Nicotiana tabacum nta-MIR6156 precursor miRNA


Sequence

875 reads, 153.0 reads per million, 32 experiments
gucaccaaacagaAAUAGGACAUCUUCAACACUcugcaaugguauucugaauaacaacagaugccuuugcggagugUUGAAGAUGUUCUAUUUCUGUucgaugaugg
((((.(.((((((((((((((((((((((((((((((((.(((((.(((........)))))))).)))))))))))))))))))))))))))))))).).))))..

Structure
--    c a                                u     u   aau 
  guca c aacagaAAUAGGACAUCUUCAACACUcugcaa gguau cug   a
  |||| | |||||||||||||||||||||||||||||||| ||||| |||    
  uagu g uUGUCUUUAUCUUGUAGAAGUUgugaggcguu ccgua gac   a
gg    a c                                u     -   aac 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6156-5p

Accession MIMAT0058154
Description Nicotiana tabacum nta-miR6156-5p mature miRNA
Sequence 14 - AAUAGGACAUCUUCAACACU - 33
Evidence experimental
unknown

Mature nta-miR6156-3p

Accession MIMAT0024759
Description Nicotiana tabacum nta-miR6156-3p mature miRNA
Sequence 77 - UUGAAGAUGUUCUAUUUCUGU - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28