miRBase entry: nta-MIR6157

Stem-loop nta-MIR6157


Accession
MI0021450
Description
Nicotiana tabacum nta-MIR6157 precursor miRNA


Sequence

10033 reads, 1651.0 reads per million, 41 experiments
uucggauuaaUGGUAGACGUAGGAUUUGAAGAcUUUAAAUCCUAGUCUUCCAUUUGucuuagaa
...((((.(((((.((((.(((((((((((...))))))))))))))).))))).)))).....

Structure
--uuc    u     U    G           G 
     ggau aaUGG AGAC UAGGAUUUGAA  
     |||| ||||| |||| ||||||||||| A
     ucuG UUACC UCUG AUCCUAAAUUU  
aagau    U     U    -           c 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6157-5p

Accession MIMAT0024760
Description Nicotiana tabacum nta-miR6157-5p mature miRNA
Sequence 11 - UGGUAGACGUAGGAUUUGAAGA - 32
Evidence experimental
Illumina [1]

Mature nta-miR6157-3p

Accession MIMAT0058155
Description Nicotiana tabacum nta-miR6157-3p mature miRNA
Sequence 34 - UUUAAAUCCUAGUCUUCCAUUUG - 56
Evidence experimental
unknown

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28