Stem-loop nta-MIR5303a

Accession

MI0021451

Description

Nicotiana tabacum nta-MIR5303a precursor miRNA

Literature search

1 open access papers mention nta-MIR5303a
(1 sentences)

Sequence

11074 reads, 1340.0 reads per million, 46 experiments

ggacucuccgAAAAUGUGGCCGGAUACGUGUcggauccuccaaaaguagugcauuuuugaaggauccgacACGGGUGCGGCUACAUUUUGGagaguccgcgcaa
(((((((((.((((((((((((.((.(((((((((((((.(((((((.....))))))).))))))))))))).)).)))))))))))))))))))))......

Structure

------         g            G  A             c       a 
      ggacucucc AAAAUGUGGCCG AU CGUGUcggauccu caaaagu g
      ||||||||| |||||||||||| || ||||||||||||| ||||||| u
      ccugagaGG UUUUACAUCGGC UG GCAcagccuagga guuuuua g
aacgcg         -            G  G             a       c 

Annotation confidence Medium

Genome context

Unknown

Mature nta-miR5303a-5p

• Accession: MIMAT0024761
• Description: Nicotiana tabacum nta-miR5303a-5p mature miRNA
• Sequence: 11 - AAAAUGUGGCCGGAUACGUGU - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR5303a-3p

• Accession: MIMAT0058156
• Description: Nicotiana tabacum nta-miR5303a-3p mature miRNA
• Sequence: 71 - ACGGGUGCGGCUACAUUUUGG - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28