miRBase entry: nta-MIR6145e

Stem-loop nta-MIR6145e


Accession
MI0021455
Description
Nicotiana tabacum nta-MIR6145e precursor miRNA

Literature search
1 open access papers mention nta-MIR6145e
(2 sentences)

Sequence

guaaugagcAUUGUUACAUGUAGCACUGGCucgcauaaauauuuaccagcccgugcucaugugacaauccccuuugcucg
.....(((((((((((((((.(((((.((((.(.(........).).)))).))))))))))))))).......))))).

Structure
guaau     -------          U     U    c c uaa 
     gagcA       UUGUUACAUG AGCAC GGCu g a   a
     |||||       |||||||||| ||||| |||| | |    
     cucgu       aacaguguac ucgug ccga c u   u
----g     uuccccu          -     c    c a uua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature nta-miR6145e

Accession MIMAT0024765
Description Nicotiana tabacum nta-miR6145e mature miRNA
Sequence 10 - AUUGUUACAUGUAGCACUGGC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22353177
    Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
    Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
    BMC Plant Biol (2012) 12:28