Stem-loop nta-MIR6158b

Accession

MI0021457

Description

Nicotiana tabacum nta-MIR6158b precursor miRNA

Gene family

MIPF0001461; MIR6158

Sequence

ucaaaaugcccAAGUUCGAUUUGUACGAAGGGCauggcaauccuauggcacaucuacggggcuuuuguagcaaaaugaggggagcagggagaaaagaugagcuacugauagcuuacuuuggccagaauuugagcgggucggcacuggagugguauacaa
.....((((((.((((((((((((.((((.....((((..((((...((...(((.((..(((.....)))....)))))...)).))))..((((.(((((((....))))))))))).))))...)))).))))))))).)))...).)))))....

Structure

ucaaa     - --A   -         A    GGGCa    ----------------------------aa    aug  aca   a  --gg   u 
     augcc c   AGU UCGAUUUGU CGAA     uggc                              uccu   gc   ucu cg    gcu u
     ||||| |   ||| ||||||||| ||||     ||||                              ||||   ||   ||| ||    ||| u
     uaugg g   uca ggcugggcg guuu     accg                              aggg   cg   gga gu    cga g
-aaca     u agg   c         a    --aag    guuucauucgauagucaucgaguagaaaag    --a  agg   -  aaaa   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6158b

• Accession: MIMAT0024767
• Description: Nicotiana tabacum nta-miR6158b mature miRNA
• Sequence: 12 - AAGUUCGAUUUGUACGAAGGGC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28