Stem-loop nta-MIR6161d

Accession

MI0021463

Description

Nicotiana tabacum nta-MIR6161d precursor miRNA

Literature search

1 open access papers mention nta-MIR6161d
(1 sentences)

Sequence

6594 reads, 650.0 reads per million, 42 experiments

uaaguaugcuUGAACUCCAGCAUAUUAUACUggaguuccagcaaguauaaauugucuaguAUAAUAUACUGGAGUUUGGAacaccaaugc
.........(((((((((((.(((((((((((((....................))))))))))))).)))))))))))...........

Structure

--uaaguaugc           C             guuccagca 
           uUGAACUCCAG AUAUUAUACUgga         a
           ||||||||||| |||||||||||||          
           GGUUUGAGGUC UAUAAUAugaucu         g
cguaaccacaA           A             guuaaauau 

Annotation confidence Low

Genome context

Unknown

Mature nta-miR6161d-5p

• Accession: MIMAT0024773
• Description: Nicotiana tabacum nta-miR6161d-5p mature miRNA
• Sequence: 11 - UGAACUCCAGCAUAUUAUACU - 31
• Evidence: experimental ; Illumina [1]

Mature nta-miR6161d-3p

• Accession: MIMAT0058168
• Description: Nicotiana tabacum nta-miR6161d-3p mature miRNA
• Sequence: 61 - AUAAUAUACUGGAGUUUGGA - 80
• Evidence: experimental ; unknown

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28