Stem-loop nta-MIR6161a

Accession

MI0021464

Description

Nicotiana tabacum nta-MIR6161a precursor miRNA

Gene family

MIPF0001465; MIR6161

Sequence

auuuugcugcaacagagacugguccagcauaauauauuggaguucggugcaccuguguaugaacuccagcauauuauGCUGGACCGGUAUACUUUGCUGACuccaguauaa
....(((((((.(((((((((((((((((((((((.((((((((((.((((....)))))))))))))).))))))))))))))))))...))))).))....)))))...

Structure

auuu     ----  a     ---                  a          g    c 
    ugcug    ca cagag   acugguccagcauaauau uuggaguucg ugca c
    |||||    || |||||   |||||||||||||||||| |||||||||| ||||  
    augac    GU GUUUC   UGGCCAGGUCGuauuaua gaccucaagu augu u
-aau     cuCA  C     AUA                  c          -    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature nta-miR6161a

• Accession: MIMAT0024774
• Description: Nicotiana tabacum nta-miR6161a mature miRNA
• Sequence: 78 - GCUGGACCGGUAUACUUUGCUGAC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28