Stem-loop nta-MIR6163

Accession

MI0021469

Description

Nicotiana tabacum nta-MIR6163 precursor miRNA

Sequence

13666 reads, 742.0 reads per million, 43 experiments

ugagucaaaugauUUAUGGCAUGUACGUUUGGaucaugucaauuauaaaaccuugugaaaaaugauuaacuUGGAAGUACUGCCUAAGUUUGAaugcgcaaaa
((.((.....((((((.((((.((((.(((.((....((((.((((((....))))))....))))....)).))))))))))))))))).....)).))...

Structure

---  a  caaau      U    U    G   G  ucau    ---a      a 
   ug gu     gauUUA GGCA GUAC UUU Ga    guca    uuauaa a
   || ||     |||||| |||| |||| ||| ||    ||||    ||||||  
   ac cg     UUGAAU CCGU CAUG AAG Uu    uagu    aguguu c
aaa  g  uaAGU      -    -    -   G  caau    aaaa      c 

Annotation confidence Low

Genome context

Unknown

Mature nta-miR6163-5p

• Accession: MIMAT0058174
• Description: Nicotiana tabacum nta-miR6163-5p mature miRNA
• Sequence: 14 - UUAUGGCAUGUACGUUUGG - 32
• Evidence: experimental ; unknown

Mature nta-miR6163-3p

• Accession: MIMAT0024779
• Description: Nicotiana tabacum nta-miR6163-3p mature miRNA
• Sequence: 72 - UGGAAGUACUGCCUAAGUUUGA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22353177
   Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)
   Tang S, Wang Y, Li Z, Gui Y, Xiao B, Xie J, Zhu QH, Fan L
   BMC Plant Biol (2012) 12:28