Stem-loop hvu-MIR5049b

Accession

MI0021487

Description

Hordeum vulgare hvu-MIR5049b precursor miRNA

Literature search

2 open access papers mention hvu-MIR5049b
(4 sentences)

Sequence

aucacuauuacucccuguguaucacaauacuuguaguugggggcacuuguauuaguguuccccaccaAGUAUUUAGGUACAGAGGGAGuagnaacuuc
........((((((((.((((((..((((((((..((.(((((((((......))))))))).))))))))))..)))))).))))))))........

Structure

aucacuau        g      ac        ua  u         ug 
        uacucccu uguauc  aauacuug  gu gggggcacu  u
        |||||||| ||||||  ||||||||  || |||||||||   
        auGAGGGA ACAUGG  UUAUGAac  ca cccuuguga  a
cuucaang        G      AU        --  c         uu 

Annotation confidence Low

Genome context

Unknown

Mature hvu-miR5049b

• Accession: MIMAT0024797
• Description: Hordeum vulgare hvu-miR5049b mature miRNA
• Sequence: 68 - AGUAUUUAGGUACAGAGGGAG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984