miRBase entry: hvu-MIR6188

Stem-loop hvu-MIR6188


Accession
MI0021502
Description
Hordeum vulgare hvu-MIR6188 precursor miRNA


Sequence

guuggugaguuggcuggguuggcugucgguuccuccguuugcauuaccuccaucuucgcaggggcggugucaGGUGGAUCGAUGAACCCGGCGAggacgcuggg
.((((((..((.((((((((...(((((((.((.((....(((((.((((..........)))).)))))..)).))))))))))))))))).))..)))))).

Structure
g      ag  g        ggc       u  u  guuu     a    cauc 
 uuggug  uu gcuggguu   ugucggu cc cc    gcauu ccuc    u
 ||||||  || ||||||||   ||||||| || ||    ||||| ||||     
 ggucgc  gA CGGCCCAA   GUAGCUA GG GG    ugugg gggg    u
g      ag  G        ---       -  U  --ac     c    acgc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR6188

Accession MIMAT0024812
Description Hordeum vulgare hvu-miR6188 mature miRNA
Sequence 73 - GGUGGAUCGAUGAACCCGGCGA - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22489137
    Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
    Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
    Int J Mol Sci (2012) 13:2973-2984