Stem-loop hvu-MIR6193

Accession

MI0021509

Description

Hordeum vulgare hvu-MIR6193 precursor miRNA

Sequence

uagggguguuguugCUCUGCCACCGGUCCAUGACGACaccugagcgacucccacugcaucagagcuucggaagcagaguuuucugccaucccuccaauacaucucugcggugucuuuugugaugcagcagaacuugugcgccgagagcuuuccguugucgaaggcaauggauugaggucagguagcuuucccuc
.(((((....(((((.(((((..((((((((((((((..(((((((........))).))))((((((((..((((((((((((((.(((.(......(((((.....))))).....).))))))).))))))).))).)))).))))....)))))).......)))))))).)).))))))))..))))).

Structure

u     uguu     U   -  AC        -------      accugagcgacucccacugcaucag    -    aa   -       -    c   c uccaau     u 
 agggg    guugC CUG CC  CGGUCCAU       GACGAC                         agcu ucgg  gca gaguuuu cugc auc c      acauc c
 |||||    ||||| ||| ||  ||||||||       ||||||                         |||| ||||  ||| ||||||| |||| ||| |      ||||| u
 ucccu    cgaug gac gg  guuaggua       cuguug                         ucga agcc  cgu uucaaga gacg uag g      ugugg g
c     --uu     -   u  -a        acggaag      ---------------------ccuu    g    -g   g       c    -   u -uuuuc     c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR6193

• Accession: MIMAT0024819
• Description: Hordeum vulgare hvu-miR6193 mature miRNA
• Sequence: 15 - CUCUGCCACCGGUCCAUGACGAC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984