Stem-loop hvu-MIR6213

Accession

MI0021531

Description

Hordeum vulgare hvu-MIR6213 precursor miRNA

Literature search

2 open access papers mention hvu-MIR6213
(2 sentences)

Sequence

gauuagucuugaggaugaucguuuggucaugcugggaaagacagaaacuuucugcuccggaaaagaauuuuuauuuuuuucuauaagagauuuugaguugauucuuuuugcugcagauugcuacacaaauucuucagacugucauaauuuuucagaauuuuugaaguaccagaguuaugcgaaacauACAGAUUGCUACAGACUGGUCugcuauuaac
(((((((((..((.((((((....)))))).)).(((..(.(((((...)))))))))((((((((((....))))))))))...((((((((((((.............(((.((((((.....)))..))).))).............))))))))))))...(((.(((...((((.....))))....))).))))))))))))..........

Structure

----------         ugaggaugaucguuuggucaugcugggaaagacagaaacuuucugcuccggaaaagaauuuuuauuuuuuucuauaagagauuuugaguugauucuuuuugcugcagauugcuacacaaauucuucagacugucauaauuuuucagaauuuuugaa   c   -agu    c 
          gauuagucu                                                                                                                                                            gua cag    uaug g
          |||||||||                                                                                                                                                            ||| |||    |||| a
          CUGGUCAGA                                                                                                                                                            CAU GUU    Auac a
caauuaucgu         ------------------------------------------------------------------------------------------------------------------------------------------------------------   C   AGAC    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hvu-miR6213

• Accession: MIMAT0024841
• Description: Hordeum vulgare hvu-miR6213 mature miRNA
• Sequence: 188 - ACAGAUUGCUACAGACUGGUC - 208
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22489137
   Identification and characterization of microRNAs from barley (Hordeum vulgare L.) by high-throughput sequencing
   Lv S, Nie X, Wang L, Du X, Biradar SS, Jia X, Weining S
   Int J Mol Sci (2012) 13:2973-2984