Stem-loop mmu-mir-6236

Accession

MI0021583

Symbol

MGI: Mir6236

Description

Mus musculus mmu-mir-6236 precursor miRNA

Literature search

4 open access papers mention mmu-mir-6236
(5 sentences)

Sequence

63779 reads, 152.0 reads per million, 159 experiments

acaacucaccugccgaaucaacuagccCUGAAAAUGGAUGGCGCUggagcguggggaccauacccaGCCGUCGCCGGCAGUCAGGgguggggguggggguggagaaagaaaaaaaaucaauaa
.....((((((.(((...(..(((.((((((...(((.(((((((((.(.((((...)))).))))).))))))))....)))))).)))..)))))))))).....................

Structure

----------------acaac      g   aau aa   g      -AAA   A     -    a c    g 
                     ucaccu ccg   c  cua ccCUGA    UGG UGGCG CUgg g gugg  
                     |||||| |||   |  ||| ||||||    ||| ||||| |||| | |||| g
                     gguggg ggu   g  ggu gGGACU    GCC GCUGC Gacc c uacc  
aauaacuaaaaaaaagaaaga      -   --- gg   g      GACG   -     C    - a    a 

Annotation confidence Medium

Genome context

9: 110110355-110110477 [+]

Mature mmu-miR-6236-5p

• Accession: MIMAT0050742
• Description: Mus musculus mmu-miR-6236-5p mature miRNA
• Sequence: 28 - CUGAAAAUGGAUGGCGCU - 45
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-6236-3p

• Accession: MIMAT0024857
• Description: Mus musculus mmu-miR-6236-3p mature miRNA
• Sequence: 67 - GCCGUCGCCGGCAGUCAGG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22580345
   Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kalpha signaling in cardiac hypertrophy
   "Yang KC, Ku YC, Lovett M, Nerbonne JM"
   "J Mol Cell Cardiol (2012) 53:101-112