Stem-loop mmu-mir-6240

Accession

MI0021587

Symbol

MGI: Mir6240

Description

Mus musculus mmu-mir-6240 precursor miRNA

Literature search

10 open access papers mention mmu-mir-6240
(23 sentences)

Sequence

47336 reads, 153.0 reads per million, 157 experiments

uugagaaaaacaaaaccaaaaaaccCCAAAGCAUCGCGAAGGCCCACGGCGgguguugacucgaugugaUUUCUGCCCAGUGCUCUGAAggucaaugugaagaaaugugacucucuu
..((((...(((....((....(((.((.(((((.((((((...((((.(((((....))))).)))).)))).))...))))).))..))).....))......)))...))))..

Structure

uu    aaa   --aaac  -aaaa   -C  A     --C  -    GCC    G     g 
  gaga   aca      ca     acc  CA AGCAU   GC GAAG   CACG CGggu u
  ||||   |||      ||     |||  || |||||   || ||||   |||| |||||  
  cucu   ugu      gu     ugg  GU UCGUG   CG CUUU   gugu gcuca u
uu    cag   aaagaa  guaac   AA  C     ACC  U    --a    a     g 

Annotation confidence Medium

Genome context

5: 114990009-114990125 [+]

Mature mmu-miR-6240-5p

• Accession: MIMAT0024861
• Description: Mus musculus mmu-miR-6240-5p mature miRNA
• Sequence: 26 - CCAAAGCAUCGCGAAGGCCCACGGCG - 51
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-6240-3p

• Accession: MIMAT0050743
• Description: Mus musculus mmu-miR-6240-3p mature miRNA
• Sequence: 70 - UUUCUGCCCAGUGCUCUGAA - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22580345
   Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3Kalpha signaling in cardiac hypertrophy
   "Yang KC, Ku YC, Lovett M, Nerbonne JM"
   "J Mol Cell Cardiol (2012) 53:101-112