Stem-loop osa-MIR6246

Accession

MI0021594

Description

Oryza sativa osa-MIR6246 precursor miRNA

Literature search

1 open access papers mention osa-MIR6246
(1 sentences)

Sequence

10787 reads, 61.0 reads per million, 133 experiments

aacccucagaUUGGGGAUUUCCUGCCGGAGGAAgcuuuuuggaggagcugccuUUGGGAGGAACUCUUCCAGUUCugaggguuu
(((((((((((((((((.(((((.(((((((.(((((((...))))))).))))))).))))).)).))))).)))))))))).

Structure

-          -     -  U     G       A       u 
 aacccucaga UUGGG GA UUCCU CCGGAGG Agcuuuu  
 |||||||||| ||||| || ||||| ||||||| ||||||| g
 uugggaguCU GACCU CU AAGGA GGUUucc ucgagga  
u          U     U  C     G       g       g 

Annotation confidence Medium

Genome context

3: 1625438-1625521 [+]

Mature osa-miR6246-5p

• Accession: MIMAT0024867
• Description: Oryza sativa osa-miR6246-5p mature miRNA
• Sequence: 11 - UUGGGGAUUUCCUGCCGGAGGAA - 33
• Evidence: experimental ; Illumina [1]

Mature osa-miR6246-3p

• Accession: MIMAT0056313
• Description: Oryza sativa osa-miR6246-3p mature miRNA
• Sequence: 54 - UUGGGAGGAACUCUUCCAGUUC - 75
• Evidence: experimental ; unknown

References

1. PubMed ID: 22585409
   Novel miRNAs in the control of arsenite levels in rice
   "Liu Q"
   "Funct Integr Genomics (2012) 12:649-658