miRBase entry: osa-MIR6247

Stem-loop osa-MIR6247


Accession
MI0021595
Description
Oryza sativa osa-MIR6247 precursor miRNA


Sequence

336 reads, 3.0 reads per million, 69 experiments
ggucuacgguuugUGCCAUUAGGUCAAUCAGCCAgcucuggcuaguuuaucugguaugcaaagagccagagcUGGCUGAUUGACCUAAUGGCAcauuauagac
.(((((.....((((((((((((((((((((((((((((((((..(((((.....))).))..))))))))))))))))))))))))))))))))...)))))

Structure
g     cgguu                                ag  -   c 
 gucua     ugUGCCAUUAGGUCAAUCAGCCAgcucuggcu  uu uau u
 |||||     ||||||||||||||||||||||||||||||||  || ||| g
 cagau     acACGGUAAUCCAGUUAGUCGGUcgagaccga  aa gua g
-     --auu                                ga  c   u 


Annotation confidence Medium
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Genome context
7: 19977417-19977519 [-]

Database links

Mature osa-miR6247-5p

Accession MIMAT0056314
Description Oryza sativa osa-miR6247-5p mature miRNA
Sequence 14 - UGCCAUUAGGUCAAUCAGCCA - 34
Evidence experimental
unknown

Mature osa-miR6247-3p

Accession MIMAT0024868
Description Oryza sativa osa-miR6247-3p mature miRNA
Sequence 73 - UGGCUGAUUGACCUAAUGGCA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658