Stem-loop osa-MIR6252

Accession

MI0021602

Description

Oryza sativa osa-MIR6252 precursor miRNA

Literature search

1 open access papers mention osa-MIR6252
(1 sentences)

Sequence

4120 reads, 20.0 reads per million, 125 experiments

gacgaggAUGUGAUCCCUCCUAACAUAAcaaaucuagauaaccauuuaucuaaAUUCGUUGUAUUAAGAGAGGGUUaacccuugua
.((((((...(((((((((.(((.(((((.(((.(((((((....))))))).))).))))).))).))).))))))..)))))).

Structure

g      AUG      -   C   C     a   c       c 
 acgagg   UGAUCC CUC UAA AUAAc aau uagauaa c
 ||||||   |||||| ||| ||| ||||| ||| |||||||  
 uguucc   aUUGGG GAG AUU UGUUG UUA aucuauu a
a      -ca      A   A   A     C   a       u 

Annotation confidence Low

Genome context

12: 18110544-18110629 [-]

Mature osa-miR6252-5p

• Accession: MIMAT0056321
• Description: Oryza sativa osa-miR6252-5p mature miRNA
• Sequence: 8 - AUGUGAUCCCUCCUAACAUAA - 28
• Evidence: experimental ; unknown

Mature osa-miR6252-3p

• Accession: MIMAT0024875
• Description: Oryza sativa osa-miR6252-3p mature miRNA
• Sequence: 54 - AUUCGUUGUAUUAAGAGAGGGUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22585409
   Novel miRNAs in the control of arsenite levels in rice
   "Liu Q"
   "Funct Integr Genomics (2012) 12:649-658