Accession
MI0021604
Description
Oryza sativa
osa-MIR6254 precursor miRNA
Sequence
5062
reads,
20.0
reads per million, 140 experiments
aauugcauaaUGCUCCGGAUAUUAUGGCAUGuagcauauaacccuagucauuaugguaucaagguuucgcaaaacccagcauucacucaaaucauaaaaaaaacaacuuguugacacauauucacuucauuuuucaugccauaaaccacuauguauuguucaaauguugguuacuugaucaggaugaccaguuuaaucagucaacguuuugaacauuauuaugucaaggaugguaaaauuagcugaaauuugaacuaggauggauuuuaugauacuucuagguuauagagcauaggguuaugugccucgAGUCAUAAUAUCCGGAGGUUuaugcaacu
..((((((((..((((((((((((((((.((..(((((((((((((((......(((((((.(((((....)))))(((((...........................))))).....(((((..((((..(((((((((((.....((...(((.((((((((((((((((..((((.(.((....)).).))))..)))))))).)))))))).)))...)).....))))))........)))))..))))...))))).......)))))))((((.....)))))).)))))))))))))..)).))))))))))))))))..))))))))..
..((((((((..((((((((((((((((.((..(((((((((((((((......(((((((.(((((....)))))(((((...........................))))).....(((((..((((..(((((((((((.....((...(((.((((((((((((((((..((((.(.((....)).).))))..)))))))).)))))))).)))...)).....))))))........)))))..))))...))))).......)))))))((((.....)))))).)))))))))))))..)).))))))))))))))))..))))))))..
Structure
aa UG A ua - -------cauuau agguuucgcaaaacccagcauucacucaaaucauaaaaaaaacaacuuguugacaca -ac uu -------- aaacc uau u - ac u a a uugcauaa CUCCGGAUAUUAUGGC UG gcauauaacccua gu gguauca uauuc uuca uuuca ugccau ac gua uguucaaa uguugguu uuga c gg u |||||||| |||||||||||||||| || ||||||||||||| || ||||||| ||||| |||| ||||| |||||| || ||| |||||||| |||||||| |||| | || aacguauU GAGGCCUAUAAUACUG gc cguguauugggau cg ucauagu guagg aagu aaagu auggua ug uau acaaguuu gcaacuga aauu g cc g uc UG A uc a agauauuggaucu --------------------------------------------------auuuuag auc uu cgauuaaa ggaac uau u u cu u a a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
12: 1970862-1971199 [+]
Database links
Mature osa-miR6254-5p
| Accession | MIMAT0024877 |
| Description | Oryza sativa osa-miR6254-5p mature miRNA |
| Sequence | 11 - UGCUCCGGAUAUUAUGGCAUG - 31 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR6254-3p
| Accession | MIMAT0056323 |
| Description | Oryza sativa osa-miR6254-3p mature miRNA |
| Sequence | 310 - AGUCAUAAUAUCCGGAGGUU - 329 |
| Evidence |
experimental
unknown |
References
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