miRBase entry: osa-MIR6255

Stem-loop osa-MIR6255


Accession
MI0021605
Description
Oryza sativa osa-MIR6255 precursor miRNA


Sequence

2412 reads, 20.0 reads per million, 127 experiments
aaaccaguuuUGGGAAAAAUGGGCAGUUGAGUucggccaauuuaucuaugguuucCUCAACAAUCAUUUUUCCCACAUGUuauca
..........((((((((((((...((((((...(((((.........)))))..))))))..))))))))))))..........

Structure
aaaccaguuu            GCA      Uuc     auu 
          UGGGAAAAAUGG   GUUGAG   ggcca   u
          ||||||||||||   ||||||   |||||   a
          ACCCUUUUUACU   CAACUC   uuggu   u
acuauUGUAC            -AA      -cu     auc 


Annotation confidence Low
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Genome context
7: 25018786-25018870 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR6255
Name Accession Chromosome Start End Strand Confidence




Database links

Mature osa-miR6255-5p

Accession MIMAT0024878
Description Oryza sativa osa-miR6255-5p mature miRNA
Sequence 11 - UGGGAAAAAUGGGCAGUUGAGU - 32
Evidence experimental
Illumina [1]

Mature osa-miR6255-3p

Accession MIMAT0056324
Description Oryza sativa osa-miR6255-3p mature miRNA
Sequence 56 - CUCAACAAUCAUUUUUCCCACAUGU - 80
Evidence experimental
unknown

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658