miRBase entry: osa-MIR6256

Stem-loop osa-MIR6256


Accession
MI0021606
Description
Oryza sativa osa-MIR6256 precursor miRNA


Sequence

960 reads, 7.0 reads per million, 106 experiments
gucuaccggaaCUACACCUACGACGAGUACUACAagaaguucuggagcagaaaccucgaccaagaacacugcuuggagcucuucagaacaacaccuacagacacaucuugaauucuugaucuagucgagaacugguuuGUAGUACUCGGUUGUAGGUGUAggugguguuu
...(((((...(((((((((((((((((((((((((..(((((((((.((.........(((((.......)))))..)))))))))))........(((............((((((((...))))))))))).)))))))))))).))))))))))))).)))))...

Structure
guc     gaa             -            --------------------------------------------aa         c  aaaccucga     aa 
   uaccg   CUACACCUACGAC GAGUACUACAag                                              guucuggag ag         ccaag  c
   |||||   ||||||||||||| ||||||||||||                                              ||||||||| ||         |||||  a
   guggu   gAUGUGGAUGUUG CUCAUGAUGuuu                                              caagacuuc uc         gguuc  c
uuu     --g             G            ggucaagagcugaucuaguucuuaaguucuacacagacauccacaa         -  -------ga     gu 


Annotation confidence Low
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Genome context
3: 1235626-1235795 [-]

Database links

Mature osa-miR6256-5p

Accession MIMAT0056325
Description Oryza sativa osa-miR6256-5p mature miRNA
Sequence 12 - CUACACCUACGACGAGUACUACA - 34
Evidence experimental
unknown

Mature osa-miR6256-3p

Accession MIMAT0024879
Description Oryza sativa osa-miR6256-3p mature miRNA
Sequence 139 - GUAGUACUCGGUUGUAGGUGUA - 160
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658