Stem-loop hme-mir-13a

Accession

MI0021735

Description

Heliconius melpomene hme-mir-13a precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

ccacucaaaauauuuguauguuuucgggccuagccugucaaagaggcggugaaauguccuuuucccuucaUAUCACAGCCACUUUGAUGUGgucgguuuacggagaccacuuagcguaucgagagg
((.(((.............(((((((((((..(((((((((((.(((.((((.(((............))).)))).))).)))))))).))).))))..))))))).............))).))

Structure

  a   aaaauauuuguau       --    ua   -        a   g    a   uccuu 
cc cuc             guuuucg  ggcc  gcc ugucaaag ggc guga aug     u
|| |||             |||||||  ||||  ||| |||||||| ||| |||| |||      
gg gag             cagaggc  uugg  ugG GUAGUUUC CCG CACU Uac     u
  a   cuaugcgauucac       au    -c   U        A   A    A   uuccc 

Annotation confidence Not enough data

Genome context

HE671256: 344603-344728 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from hme-mir-13a

Mature hme-miR-13a

• Accession: MIMAT0024940
• Description: Heliconius melpomene hme-miR-13a mature miRNA
• Sequence: 71 - UAUCACAGCCACUUUGAUGUG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98