miRBase entry: hme-mir-1b

Stem-loop hme-mir-1b

Accession

MI0021740

Description

Heliconius melpomene hme-mir-1b precursor miRNA

Sequence

gcaggcauaaccgcgcagcuccauacuucuuuacauuccauaugauaucaaauacuaUGGGAAGUAAGGAAGCACGGAAcucgcgcuaggcuaugugucuuc
..(((((((.((((((((.(((...(((((((((.(((((((..((.....))..))))))).)))))))))...))).)).))))..))...)))))))..

Structure

gc       --a  --    -  c   aua         a       ug  a 
  aggcaua   cc  gcgc ag ucc   cuucuuuac uuccaua  au u
  |||||||   ||  |||| || |||   ||||||||| |||||||  || c
  ucugugu   gg  cgcg uc AGG   GAAGGAAUG AGGGUau  ua a
cu       auc  au    c  A   CAC         A       ca  a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

HE672073: 1166256-1166357 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-1b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-1b

Accession	MIMAT0024945
Description	Heliconius melpomene hme-miR-1b mature miRNA
Sequence	58 - UGGGAAGUAAGGAAGCACGGAA - 79
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98