miRBase entry: hme-mir-79

Stem-loop hme-mir-79


Accession
MI0021784
Description
Heliconius melpomene hme-mir-79 precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

gcacgaugcgacgcuuuggcgauuuagcuccaugacguugcguguaugcucaUAAAGCUAGAUUACCAAAGCAUcgcgucgaugc
(((((((((((.(((((((.(((((((((..(((((((.......))).))))..))))))))).))))))).)))))))).)))

Structure
   -        c       c         cc    -   ug 
gca cgaugcga gcuuugg gauuuagcu  auga cgu  c
||| |||||||| ||||||| |||||||||  |||| |||  g
cgu gcugcgcU CGAAACC UUAGAUCGA  Uacu gua  u
   a        A       A         AA    c   ug 


Annotation confidence Not enough data
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Genome context
HE669612: 9681-9765 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from hme-mir-79
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-79

Accession MIMAT0024987
Description Heliconius melpomene hme-miR-79 mature miRNA
Sequence 53 - UAAAGCUAGAUUACCAAAGCAU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22722851
    Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    "The Heliconius Genome Consortium"
    "Nature (2012) 487:94-98