miRBase entry: rno-mir-6314

Stem-loop rno-mir-6314


Accession
MI0021832
Description
Rattus norvegicus rno-mir-6314 precursor miRNA

Literature search
1 open access papers mention rno-mir-6314
(1 sentences)

Sequence

403 reads, 4 reads per million, 60 experiments
gucuuugccugcuucggaggugaugcugggcuacguccagAGGCACUGACAGAUCUGAUGGUgauuugguauaaggucgcagccuucaggccugucacagugcccggggaauuggccacuguggucucaaugguugugu
......((((((.(((....))).)).))))((((.((((((((...(((((.(((((.((((((((......)))))...))).))))).)))))((((((.((((....)))).)))))).)))))..))).)))).

Structure
gucuuugccugcuucggaggugaugcugggc    u   --     ------------------------ACU     A     U   ---     gg 
                               uacg cca  gAGGC                           GACAG UCUGA GGU   gauuu  u
                               |||| |||  |||||                           ||||| ||||| |||   |||||   
                               gugu ggu  cucug                           cuguc ggacu ccg   cugga  a
------------------------------u    u   aa     gugucaccgguuaaggggcccgugaca     c     u   acg     au 


Annotation confidence Not enough data
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Genome context
chr2: 211682675-211682813 [+]

Database links

Mature rno-miR-6314

Accession MIMAT0025047
Description Rattus norvegicus rno-miR-6314 mature miRNA
Sequence 41 - AGGCACUGACAGAUCUGAUGGU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22605339
    Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
    "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
    "J Biol Chem (2012) 287:24397-24411

  2. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324