Stem-loop rno-mir-344i

Accession

MI0021834

Description

Rattus norvegicus rno-mir-344i precursor miRNA

Literature search

7 open access papers mention rno-mir-344i
(16 sentences)

Sequence

1084 reads, 5.0 reads per million, 85 experiments

acagggcuuuugcAAGUCAGGCUCCUGGCUGGAGUccagcucuaagcuggauccaggCUCUAGCCAGGGCUUGACUGCAcucugcucaauagagaaggg
.(((((....((((.(((((((.((((((((((((((((((...))))))......))))))))))))))))))))))))))))(((....))).....

Structure

--------------a     cuuu    A       U            ------      c 
               caggg    ugcA GUCAGGC CCUGGCUGGAGU      ccagcu  
               |||||    |||| ||||||| ||||||||||||      |||||| u
               gucuc    ACGU CAGUUCG GGACCGAUCUCg      ggucga  
gggaagagauaacuc     ----    -       -            gaccua      a 

Annotation confidence High

Genome context

chr1: 122506559-122506657 [-]

Mature rno-miR-344i-5p

• Accession: MIMAT0052038
• Description: Rattus norvegicus rno-miR-344i-5p mature miRNA
• Sequence: 14 - AAGUCAGGCUCCUGGCUGGAGU - 35
• Evidence: experimental ; Illumina [1]

Mature rno-miR-344i-3p

• Accession: MIMAT0025049
• Description: Rattus norvegicus rno-miR-344i-3p mature miRNA
• Sequence: 58 - CUCUAGCCAGGGCUUGACUGCA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324