Stem-loop rno-mir-344g

Accession

MI0021837

Description

Rattus norvegicus rno-mir-344g precursor miRNA

Literature search

7 open access papers mention rno-mir-344g
(16 sentences)

Sequence

2425 reads, 7.0 reads per million, 68 experiments

aauuucugucAGUCAGGCUCCUGGCAGGAGUccagcucucagcugguuccaggcucUAGCCAGGGGCUUGACUGCAAgc
......((.((((((((((((((((.(((((((((((...))))))......))))).))))))))))))))))))...

Structure

aauuuc  u                A     ------      c 
      ug cAGUCAGGCUCCUGGC GGAGU      ccagcu  
      || |||||||||||||||| |||||      |||||| u
      AC GUCAGUUCGGGGACCG Ucucg      ggucga  
---cgA  -                A     gaccuu      c 

Annotation confidence Medium

Genome context

chr1: 122409917-122409995 [-]

Mature rno-miR-344g-5p

• Accession: MIMAT0025052
• Description: Rattus norvegicus rno-miR-344g-5p mature miRNA
• Sequence: 11 - AGUCAGGCUCCUGGCAGGAGU - 31
• Evidence: experimental ; Illumina [1]

Mature rno-miR-344g-3p

• Accession: MIMAT0061434
• Description: Rattus norvegicus rno-miR-344g-3p mature miRNA
• Sequence: 57 - UAGCCAGGGGCUUGACUGCAA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324