Stem-loop rno-mir-6322

Accession

MI0021846

Description

Rattus norvegicus rno-mir-6322 precursor miRNA

Sequence

cagggcucugugugccuacgguccacuugugcuguggggaaaagugcaggucuguacgcaucuuuccUGUCUGUACCACAUGGCACGGUggaacacaggucucugucuuccuccuccug
(((((.(((((((........((((((.((((((((((....((.(((((...(.......)...)))))))...)).))))))))))))))))))))).)))))..............

Structure

--------------     c       gccuacgg      u        -  gaaa  u     ucu ua 
              caggg ucugugu        uccacu gugcugug gg    ag gcagg   g  c
              ||||| |||||||        |||||| |||||||| ||    || |||||   |  g
              gucuc ggacaca        aggUGG CACGGUAC CC    UC UGUcc   c  c
guccuccuccuucu     u       --------      -        A  -AUG  -     uuu ua 

Annotation confidence Low

Genome context

chr12: 26825060-26825178 [-]

Mature rno-miR-6322

• Accession: MIMAT0025061
• Description: Rattus norvegicus rno-miR-6322 mature miRNA
• Sequence: 68 - UGUCUGUACCACAUGGCACGGU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324