Stem-loop rno-mir-6323

Accession

MI0021847

Description

Rattus norvegicus rno-mir-6323 precursor miRNA

Sequence

ucugugaaugcagugagugcccagagcaggauggaggccggggaagguggccucacguccUGGAACUCCAUCUCUGGUCUGUGCAggcaaugugaggagucagac
((((.....(((.((..(((.((((.((((((((((..(.((((..(((....))).)))).)..))))))).))).)))).)))..)).))).......)))).

Structure

-    --ugaau   g  ag   c    g   -       gc g    ag   g 
 ucug       gca ug  ugc caga cag gauggag  c ggga  gug c
 ||||       ||| ||  ||| |||| ||| |||||||  | ||||  |||  
 agac       ugu ac  ACG GUCU GUC CUACCUC  G Uccu  cac c
c    ugaggag   a  gg   U    G   U       AA G    -g   u 

Annotation confidence Not enough data

Genome context

chr11: 84827032-84827136 [+]

Mature rno-miR-6323

• Accession: MIMAT0025062
• Description: Rattus norvegicus rno-miR-6323 mature miRNA
• Sequence: 61 - UGGAACUCCAUCUCUGGUCUGUGCA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324