Stem-loop rno-mir-6324

Accession

MI0021848

Description

Rattus norvegicus rno-mir-6324 precursor miRNA

Literature search

1 open access papers mention rno-mir-6324
(3 sentences)

Sequence

15713 reads, 16 reads per million, 479 experiments

uggaaucaccagauagcuggggucaaggugcucugcugacugccuaugggcugugggauccaacugagUCAGUAGGCCAGACAGCAAGCACcuuuaucccuugagcaauuucacugacccu
.((..(((..((((.((((((((.((((((((.(((((.((((((((.((((..(........)..)))).))))).))).))))))))))))).)))))...))).))))...))).)).

Structure

u  aa   -cc    a   ---     c        c     a   -     g    gu gga 
 gg  uca   agau gcu   ggggu aaggugcu ugcug cug ccuau ggcu  g   u
 ||  |||   |||| |||   ||||| |||||||| ||||| ||| ||||| ||||  |    
 cc  agu   uuua cga   cccua uucCACGA ACGAC GAC GGAUG CUga  c   c
u  -c   cac    a   guu     u        -     A   C     A    gu aac 

Annotation confidence Medium

Genome context

chr11: 36383529-36383649 [-]

Mature rno-miR-6324

• Accession: MIMAT0025063
• Description: Rattus norvegicus rno-miR-6324 mature miRNA
• Sequence: 69 - UCAGUAGGCCAGACAGCAAGCAC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324