Stem-loop rno-mir-6327

Accession

MI0021851

Description

Rattus norvegicus rno-mir-6327 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

agaagacacagaggagccucggucacagcaugguagacugcgaugucuguagucccggcugggcaggaagucucCGGACUGUAGAUCCAUCUCccacagcuaggcugaggagucuguucugacuugugcucac
.((..((((((((.((((((((((..(((.(((.(((.((.((..((((((((((.((..((((.....))))))))))))))))))))))).)))..))).))))))))...)).)))))...)))..))..

Structure

-a  ag   ---     g  ---        ac   -a   u   c  c  ug          c  cu    a 
  ga  aca   cagag ag   ccucgguc  agc  ugg aga ug ga  ucuguagucc gg  gggc g
  ||  |||   ||||| ||   ||||||||  |||  ||| ||| || ||  |||||||||| ||  |||| g
  cu  ugu   gucuu uc   ggagucgg  ucg  acc UCU AC CU  AGAUGUCAGG Cc  ucug a
ca  cg   uca     g  uga        -a   ac   C   -  -  --          -  --    a 

Annotation confidence Not enough data

Genome context

chr10: 68977601-68977733 [-]

Mature rno-miR-6327

• Accession: MIMAT0025066
• Description: Rattus norvegicus rno-miR-6327 mature miRNA
• Sequence: 75 - CGGACUGUAGAUCCAUCUC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324