Stem-loop rno-mir-6330

Accession

MI0021854

Description

Rattus norvegicus rno-mir-6330 precursor miRNA

Sequence

gauggagugcagugugacauuucaugugcauguguguaauaaccagaucugggucauuucaguacauguacacagugUAUAAUGACCAGAUCUGGGUCAacacauguguaacaaucagauccaggucaucggcagaccc
.((((((((((...)).)))))))).(((((((((((.....((((((((((.(((((...((((((.......)))))))))))))))))))))....))))))))))).............((((.......)))).

Structure

---gauggagugcagugugacauuucaug           aauaa          g     uca      gu 
                             ugcaugugugu     ccagaucugg ucauu   guacau  a
                             |||||||||||     |||||||||| |||||   ||||||  c
                             auguguacaca     GGUCUAGACC AGUAA   UAUgug  a
cccagacggcuacuggaccuagacuaaca           -ACUG          -     ---      ac 

Annotation confidence Low

Genome context

chr8: 113718116-113718254 [-]

Mature rno-miR-6330

• Accession: MIMAT0025069
• Description: Rattus norvegicus rno-miR-6330 mature miRNA
• Sequence: 78 - UAUAAUGACCAGAUCUGGGUCA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22605339
   Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
   "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
   "J Biol Chem (2012) 287:24397-24411


2. PubMed ID: 22908386
   MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
   "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
   "J Biol Chem (2012) 287:25312-25324