Stem-loop pde-MIR166b

Accession

MI0022092

Description

Pinus densata pde-MIR166b precursor miRNA

Literature search

1 open access papers mention pde-MIR166b
(5 sentences)

Sequence

ggggaauguugucuggcucgaggucacucagauuugaugacgaugauucuuugagcugagugacgUCGGACCAGGCUUCAUUCC
..((((((..((((((.((((.(((((((((.(((((.((.......)).)))))))))))))).)))).))))))..))))))

Structure

gg      uu      c    g         a     u  cg 
  ggaaug  gucugg ucga gucacucag uuuga ga  a
  ||||||  |||||| |||| ||||||||| ||||| ||  u
  CCUUAC  CGGACC GGCU cagugaguc gaguu cu  g
--      UU      A    g         -     u  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR166b

• Accession: MIMAT0025328
• Description: Pinus densata pde-miR166b mature miRNA
• Sequence: 66 - UCGGACCAGGCUUCAUUCC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132