Stem-loop pde-MIR169

Accession

MI0022093

Description

Pinus densata pde-MIR169 precursor miRNA

Literature search

1 open access papers mention pde-MIR169
(2 sentences)

Sequence

acuauuuauuCAGCCAAGGAUGACUUGCCUAgaucuuguuaccaguaucggcuaguuaugcugauaucgauuucagucacuaggugagucguccuuggcuaaa
...........(((((((((((((((((((((...(((..(.(.((((((((.......)))))))).).)..)))...)))))))))))))))))))))...

Structure

acuauuuauuC                     auc   uu c a        ua 
           AGCCAAGGAUGACUUGCCUAg   uug  a c guaucggc  g
           |||||||||||||||||||||   |||  | | ||||||||  u
           ucgguuccugcugaguggauc   gac  u g uauagucg  u
--------aaa                     acu   uu a c        ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR169

• Accession: MIMAT0025329
• Description: Pinus densata pde-miR169 mature miRNA
• Sequence: 11 - CAGCCAAGGAUGACUUGCCUA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132