Stem-loop pde-MIR482d

Accession

MI0022100

Description

Pinus densata pde-MIR482d precursor miRNA

Literature search

1 open access papers mention pde-MIR482d
(3 sentences)

Sequence

gucauggggucuuuaggcuuuggaggauuuggaaaggcuuagucauucuuuuuaccgaggauauucgauuuucuaagaaCCUUUCCAACGCCUCCCAUGCCuauaguccucauuguacaugucacccgaucgcag
(((((((((.((.(((((...(((((..((((((((((((((((((((((......))))))....))....)))))..)))))))))..)))))...))))).)).))))).)).)).................

Structure

-----------------  -  -     u  u     uuu     au         --     ----  ----      uu 
                 gu ca ugggg cu uaggc   ggagg  uuggaaagg  cuuag    uc    auucuu  u
                 || || ||||| || |||||   |||||  |||||||||  |||||    ||    ||||||   
                 ca gu acucc ga auCCG   CCUCC  AACCUUUCC  gaauc    ag    uaggag  a
gacgcuagcccacugua  u  u     u  u     UAC     GC         aa     uuuu  cuua      cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR482d

• Accession: MIMAT0025336
• Description: Pinus densata pde-miR482d mature miRNA
• Sequence: 80 - CCUUUCCAACGCCUCCCAUGCC - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132