Stem-loop ssc-mir-29b-2

Accession

MI0022126

Description

Sus scrofa ssc-mir-29b-2 precursor miRNA

Literature search

29 open access papers mention ssc-mir-29b-2
(70 sentences)

Sequence

744689 reads, 414.0 reads per million, 210 experiments

cuucuggaagCUGGUUUCACAUGGUGGCUUAGAuuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUUuuaggaguaa
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))...

Structure

---         -          C      G  U    uuuucc 
   cuucuggaa gCUGGUUUCA AUGGUG CU AGAu      a
   ||||||||| |||||||||| |||||| || ||||       
   gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
aau         G          U      -  -    uguuuc 

Annotation confidence High

Genome context

chr9: 148552438-148552521 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-29b-2

Mature ssc-miR-29b-2-5p

• Accession: MIMAT0052561
• Description: Sus scrofa ssc-miR-29b-2-5p mature miRNA
• Sequence: 11 - CUGGUUUCACAUGGUGGCUUAGA - 33
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-29b-3p

• Accession: MIMAT0002137
• Description: Sus scrofa ssc-miR-29b-3p mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGUU - 74
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100