Stem-loop ssc-mir-190a

Accession

MI0022136

Description

Sus scrofa ssc-mir-190a precursor miRNA

Literature search

1 open access papers mention ssc-mir-190a
(1 sentences)

Sequence

33394 reads, 47.0 reads per million, 172 experiments

ggccucugugUGAUAUGUUUGAUAUAUUAGGuuguuauuuaauccaaCUAUAUAUCAAACAUAUUCCUacagugucuugccc
((((.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).)....))).

Structure

-   ---- u     -U                UA     uuau 
 ggc    c cugug  GAUAUGUUUGAUAUAU  GGuug    u
 |||    | |||||  ||||||||||||||||  |||||     
 ccg    g gacaU  UUAUACAAACUAUAUA  UCaac    u
c   uucu u     CC                --     cuaa 

Annotation confidence High

Genome context

chr1: 120448012-120448093 [-]

Mature ssc-miR-190a-5p

• Accession: MIMAT0025367
• Description: Sus scrofa ssc-miR-190a-5p mature miRNA
• Sequence: 11 - UGAUAUGUUUGAUAUAUUAGG - 31
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-190a-3p

• Accession: MIMAT0052686
• Description: Sus scrofa ssc-miR-190a-3p mature miRNA
• Sequence: 48 - CUAUAUAUCAAACAUAUUCCU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328