Stem-loop ssc-mir-217-2

Accession

MI0022142

Description

Sus scrofa ssc-mir-217-2 precursor miRNA

Literature search

3 open access papers mention ssc-mir-217-2
(9 sentences)

Sequence

6940 reads, 12.0 reads per million, 144 experiments

augucgcagaUACUGCAUCAGGAACUGAUUGGAUaagaauuggucaccAUCAGUUCUUAAUGCAUUGCCUUcagcauc
((((.(.((.((.(((((.((((((((((.((((........))).).)))))))))).))))).)).)).).)))).

Structure

-    c c  a  C     C          U -   aag 
 augu g ag UA UGCAU AGGAACUGAU G GAU   a
 |||| | || || ||||| |||||||||| | |||    
 uacg c UC GU ACGUA UUCUUGACUA c cug   a
c    a U  C  U     A          c a   guu 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-217-5p

• Accession: MIMAT0002131
• Description: Sus scrofa ssc-miR-217-5p mature miRNA
• Sequence: 11 - UACUGCAUCAGGAACUGAUUGGAU - 34
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-217-3p

• Accession: MIMAT0052556
• Description: Sus scrofa ssc-miR-217-3p mature miRNA
• Sequence: 49 - AUCAGUUCUUAAUGCAUUGCCUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328