miRBase entry: ssc-mir-218-2

Stem-loop ssc-mir-218-2


Accession
MI0022143
Description
Sus scrofa ssc-mir-218-2 precursor miRNA

Literature search
6 open access papers mention ssc-mir-218-2
(33 sentences)

Sequence

20 reads, 29 reads per million, 6 experiments
agauuuucugUUGUGCUUGAUCUAACCAUGUgguugccagguaugaguaaaacaugguucugucaagcaccauggaacguca
.(((.((((((.(((((((((..((((((((..((((((....)).)))).))))))))..))))))))).)))))).))).

Structure
a   u      U         CU        gg    -  g 
 gau uucugU GUGCUUGAU  AACCAUGU  uugc ca g
 ||| |||||| |||||||||  ||||||||  |||| ||  
 cug aaggua cacgaacug  uugguaca  aaug gu u
a   c      c         uc        -a    a  a 


Annotation confidence Not enough data
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Genome context
chrUScaf1267: 26754-26835 [-]

Database links

Mature ssc-miR-218

Accession MIMAT0025371
Description Sus scrofa ssc-miR-218 mature miRNA
Sequence 11 - UUGUGCUUGAUCUAACCAUGU - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328