Stem-loop ssc-mir-339-2

Accession

MI0022144

Description

Sus scrofa ssc-mir-339-2 precursor miRNA

Literature search

7 open access papers mention ssc-mir-339-2
(7 sentences)

Sequence

1374 reads, 350 reads per million, 11 experiments

uaagacaaggUCCCUGUCCUCCAGGAGCUCAugguccaauagaagcauauauacaaauggcucugaggggagaucccgcuguggcu
....(((.((...((.(((((..(((((.(((......(((......)))......))))))))))))).))...))..)))....

Structure

uaag   -a  UCC  G     CA     U   ggucca   ga 
    aca  gg   CU UCCUC  GGAGC CAu      aua  a
    |||  ||   || |||||  ||||| |||      |||   
    ugu  cc   ga gggag  ucucg gua      uau  g
ucgg   cg  cua  g     --     -   aacaua   ac 

Annotation confidence Not enough data

Genome context

chr1: 181756284-181756369 [-]

Mature ssc-miR-339

• Accession: MIMAT0025372
• Description: Sus scrofa ssc-miR-339 mature miRNA
• Sequence: 11 - UCCCUGUCCUCCAGGAGCUCA - 31
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100