Stem-loop ssc-mir-370

Accession

MI0022148

Description

Sus scrofa ssc-mir-370 precursor miRNA

Literature search

11 open access papers mention ssc-mir-370
(19 sentences)

Sequence

391289 reads, 794.0 reads per million, 156 experiments

aagacagagaagcCAGGUCACGUCUCUGCAGUUACAcagcucacgaguGCCUGCUGGGGUGGAACCUGGUcugucugucu
.(((((((.(.(((((((..((((((.((((...(((.........))).)))).))))))..))))))).).)))))))

Structure

a       g a       CA      U    UUA   agc 
 agacaga a gcCAGGU  CGUCUC GCAG   CAc   u
 ||||||| | |||||||  |||||| ||||   |||   c
 ucugucu u UGGUCCA  GUGGGG CGUC   Gug   a
-       g c       AG      U    --C   agc 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-370-5p

• Accession: MIMAT0052688
• Description: Sus scrofa ssc-miR-370-5p mature miRNA
• Sequence: 14 - CAGGUCACGUCUCUGCAGUUACA - 36
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-370-3p

• Accession: MIMAT0025373
• Description: Sus scrofa ssc-miR-370-3p mature miRNA
• Sequence: 49 - GCCUGCUGGGGUGGAACCUGGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328