Stem-loop ssc-mir-490-2

Accession

MI0022151

Description

Sus scrofa ssc-mir-490-2 precursor miRNA

Literature search

2 open access papers mention ssc-mir-490-2
(2 sentences)

Sequence

115682 reads, 158.0 reads per million, 176 experiments

cauuguucgacaCCAUGGAUCCCCAGGUGGGUcacguuucaagauacacCAACCUGGAGGACUCCAUGCUGuugagcuguu
....((((((((.(((((((((((((((.(((...((........))))).)))))).))).)))))).))))))))....

Structure

cauu        C      -   -      G   cac  uuc 
    guucgaca CAUGGA UCC CCAGGU GGU   gu   a
    |||||||| |||||| ||| |||||| |||   ||    
    cgaguuGU GUACCU AGG GGUCCA Cca   ca   a
uugu        C      C   A      A   ---  uag 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-490-5p

• Accession: MIMAT0017959
• Description: Sus scrofa ssc-miR-490-5p mature miRNA
• Sequence: 13 - CCAUGGAUCCCCAGGUGGGU - 32
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-490-3p

• Accession: MIMAT0022960
• Description: Sus scrofa ssc-miR-490-3p mature miRNA
• Sequence: 50 - CAACCUGGAGGACUCCAUGCUG - 71
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328