Stem-loop ssc-mir-1249-2

Accession

MI0022159

Description

Sus scrofa ssc-mir-1249-2 precursor miRNA

Literature search

2 open access papers mention ssc-mir-1249-2
(2 sentences)

Sequence

5 reads, 6 reads per million, 2 experiments

uguuugcauggggaggagggaggagaugggccaaguucccucugccuggaACGCCCUUCCCCCCCUUCUUCAccuagcgaac
.((((((..(((((((((((.((.((.((((...(((((........))))))))).)).))))))))))).))..))))))

Structure

u      au  -         a  a  u    caa     cuc 
 guuugc  gg ggaggaggg gg ga gggc   guucc   u
 ||||||  || ||||||||| || || ||||   |||||    
 caagcg  cc CUUCUUCCC CC CU CCCG   CAagg   g
-      au  A         -  C  U    ---     ucc 

Annotation confidence Not enough data

Genome context

chrUScaf1993: 9369-9450 [+]

Mature ssc-miR-1249

• Accession: MIMAT0025385
• Description: Sus scrofa ssc-miR-1249 mature miRNA
• Sequence: 51 - ACGCCCUUCCCCCCCUUCUUCA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328