Stem-loop ssc-mir-1468

Accession

MI0022160

Description

Sus scrofa ssc-mir-1468 precursor miRNA

Literature search

2 open access papers mention ssc-mir-1468
(2 sentences)

Sequence

452332 reads, 464.0 reads per million, 185 experiments

ugggugguuuCUCCGUUUGCCUGUUUUGCUGAcguucauuugacucauucucAGCAAAAUAAGCAAAUGGAAAauucauccau
(((((((.((.(((((((((.(((((((((((..................))))))))))).))))))))).)).))))))).

Structure

-       u  C         C           cguucauu 
 ugggugg uu UCCGUUUGC UGUUUUGCUGA        u
 ||||||| || ||||||||| |||||||||||         
 accuacu aA AGGUAAACG AUAAAACGAcu        g
u       u  A         A           cuuacuca 

Annotation confidence High

Genome context

chrX: 56757045-56757127 [-]

Mature ssc-miR-1468-5p

• Accession: MIMAT0025386
• Description: Sus scrofa ssc-miR-1468-5p mature miRNA
• Sequence: 11 - CUCCGUUUGCCUGUUUUGCUGA - 32
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-1468-3p

• Accession: MIMAT0052694
• Description: Sus scrofa ssc-miR-1468-3p mature miRNA
• Sequence: 53 - AGCAAAAUAAGCAAAUGGAAA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328