Stem-loop ssc-mir-3613

Accession

MI0022161

Description

Sus scrofa ssc-mir-3613 precursor miRNA

Literature search

2 open access papers mention ssc-mir-3613
(2 sentences)

Sequence

71499 reads, 112.0 reads per million, 212 experiments

ggguuuggauUGUUGUACUUUUUUUUUUGUUCguugcauuuuuaggaACAAAAAAAAAAGCCCAACCCUUcacaccg
.(((.((((..((((..(((((((((((((((.(.........).)))))))))))))))..))))..)))).))).

Structure

g   u    uU    UA               g ugc 
 ggu ugga  GUUG  CUUUUUUUUUUGUUC u   a
 ||| ||||  ||||  ||||||||||||||| |   u
 cca acUU  CAAC  GAAAAAAAAAACAag a   u
g   c    CC    CC               g uuu 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-3613-5p

• Accession: MIMAT0025387
• Description: Sus scrofa ssc-miR-3613-5p mature miRNA
• Sequence: 11 - UGUUGUACUUUUUUUUUUGUUC - 32
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-3613-3p

• Accession: MIMAT0052695
• Description: Sus scrofa ssc-miR-3613-3p mature miRNA
• Sequence: 48 - ACAAAAAAAAAAGCCCAACCCUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328