Stem-loop ssc-mir-2483

Accession

MI0022167

Description

Sus scrofa ssc-mir-2483 precursor miRNA

Literature search

3 open access papers mention ssc-mir-2483
(7 sentences)

Sequence

25398 reads, 41.0 reads per million, 170 experiments

ugaaaaguUCCGUCAACCAUCCAGCUGUUUggggugaugcaaacAAACAUCUGGUUGGUUGAGAGAauuuuuuacu
((((((((((..(((((((.((((.((((((............)))))).)))).)))))))..))))))))))..

Structure

--          CG       U    C      gggug 
  ugaaaaguUC  UCAACCA CCAG UGUUUg     a
  ||||||||||  ||||||| |||| ||||||      
  auuuuuuaAG  AGUUGGU GGUC ACAAAc     u
uc          AG       U    U      aaacg 

Annotation confidence High

Genome context

chrX: 117608201-117608276 [-]

Mature ssc-miR-2483-5p

• Accession: MIMAT0052697
• Description: Sus scrofa ssc-miR-2483-5p mature miRNA
• Sequence: 9 - UCCGUCAACCAUCCAGCUGUUU - 30
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-2483-3p

• Accession: MIMAT0025390
• Description: Sus scrofa ssc-miR-2483-3p mature miRNA
• Sequence: 45 - AAACAUCUGGUUGGUUGAGAGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328